Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs11064103 chr12:766741 C/T 0.000111 115 42.33 38.58 25.83 KM Plot
THYM rs11065468 chr12:121615369 T/C 2.06E-5 117 48 46.27 24.87 KM Plot
THYM rs11065469 chr12:121616456 G/A 2.06E-5 117 48 46.27 24.87 KM Plot
THYM rs11065470 chr12:121616467 T/C 2.06E-5 117 48 46.27 24.87 KM Plot
THYM rs11065471 chr12:121621245 G/A 3.55E-5 116 44.67 46.27 23.9 KM Plot
THYM rs11072766 chr15:78771546 C/T 3.52E-5 118 42.82 46.6 26 KM Plot
THYM rs11078839 chr17:10194120 A/G 4.68E-6 119 38.13 49.6 14.7 KM Plot
THYM rs1109583 chr6:47677886 A/G 1.34E-5 119 34.43 37.63 45.87 KM Plot
THYM rs11103988 chr12:86945109 G/A 0 119 38.13 59.63 4.13 KM Plot
THYM rs11103995 chr12:86968158 C/T 0 119 4.13 59.63 38.13 KM Plot
THYM rs11104005 chr12:86990974 C/T 0 119 38.13 59.63 4.13 KM Plot
THYM rs11119468 chr1:210533757 C/T 0.000301 118 46.6 35 NA KM Plot
THYM rs11119469 chr1:210536278 A/C 0.000286 119 NA 35 44.67 KM Plot
THYM rs11119470 chr1:210536387 T/C 0.000212 116 48 33.85 NA KM Plot
THYM rs111230297 chr15:93975726 C/G 4.24E-13 117 40.67 50.07 6 KM Plot